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PerlPrimer

'PerlPrimer' designs primers for standard PCR, bisulphite PCR, real-time PCR (QPCR), and sequencing by automating and simplifying the process of primer design. Current features include calculation of possible primer-dimers, retrieval of genomic or CDNA sequences from Ensembl, the ability to BLAST search primers using the NCBI server, ORF, and CpG island detection algorithms, the ability to add cloning sequences to primers, automatically adjusted to be in-frame, and QPCR primer design without manual intron-exon boundary entry.

Last updated 7 Jan, 2008


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License(s) :

GPLv2orlater

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About

Leadership
Requirements
  • Perl (Use Requirement)
  • Perl/Tk (Use Requirement)
  • libwww-perl 5.76 or later (Use Requirement)

Versions

1.1.8

1.1.8 stable released 2005-08-11

User Community and Support

User tutorial available in HTML format from http://perlprimer.sourceforge.net/tutorial.html

General Resources
Support Resources

Development

Developer Resources
Bug Tracking Resources
 

Please send comments on these web pages to bug-directory@fsf.org, send other questions to info@fsf.org.

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The copyright licensing notice below applies to this text. Any software described in this text has its own copyright notice and license, which can usually be found in the distribution itself.

Permission is granted to copy, distribute, and/or modify this document under the terms of the GNU Free Documentation License, Version 1.2 or any later version published by the Free Software Foundation; with no Invariant Sections, with no Front-Cover Texts, and with no Back-Cover Texts.