ARDEN
Arden
http://sourceforge.net/projects/arden/
specificity control for read alignments using an artificial reference
ARDEN (Artificial Reference Driven Estimation of false positives in NGS data) is a novel benchmark that estimates error rates based on real experimental reads and an additionally generated artificial reference genome. It allows the computation of error rates specifically for a dataset and the construction of a ROC- curve. Thereby, it can be used to optimize parameters for read mappers, to select read mappers for a specific problem or also to filter alignments based on quality estimation.
Licensing
License
Verified by
Verified on
Notes
License
Verified by
Debian: Andreas Tille <tille@debian.org>
Verified on
7 February 2014
Notes
License: bsdlike
Leaders and contributors
Contact(s) | Role |
---|---|
Sven H. Giese | contact |
Resources and communication
Audience | Resource type | URI |
---|---|---|
Download | http://sourceforge.net/projects/arden/files/ARDEN/ | |
Debian (Ref) (R) | https://tracker.debian.org/pkg/arden |
Software prerequisites
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