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The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by streaming several BEDTools together.

The groupBy utility is distribued in the filo package.


Download version 2.26.0 (stable)
released on 6 July 2016



LicenseVerified byVerified onNotes
OtherDebian20 March 2013
License: under-the-MIT-license

under-the-MIT-license No further explanation about which MIT

license to follow was provided.
OtherDebian20 March 2013
OtherDebian20 March 2013
BSD 2ClauseDebian20 March 2013
GPLv2Debian20 March 2013

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This entry (in part or in whole) was last reviewed on 7 October 2016.


Date 2013-03-20
Source Debian import
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