Blossoc is a linkage disequilibrium association mapping tool that attempts to build (perfect) genealogies for each site in the input, score these according to non-random clustering of affected individuals, and judge high-scoring areas as likely candidates for containing disease affecting variation. Building the local genealogy trees is based on a number of heuristics that are not guaranteed to build true trees, but have the advantage over more sophisticated methods of being extremely fast. Blossoc can therefore handle much larger data sets than more sophisticated tools, but at the cost of sacrificing some accuracy.
DocumentationUser Manual at http://www.daimi.au.dk/~mailund/Blossoc/download/getting-started-1.0.pdf
released on 13 October 2005
|License||Verified by||Verified on||Notes|
|GPLv2orlater||Ted Teah||13 October 2006|
Leaders and contributors
Resources and communication
|Bug Tracking||VCS Repository Webview||http://www.daimi.au.dk/~mailund/bugtrack/login_page.php|
This entry (in part or in whole) was last reviewed on 28 December 2016.
Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts. A copy of the license is included in the page “GNU Free Documentation License”.
The copyright and license notices on this page only apply to the text on this page. Any software or copyright-licenses or other similar notices described in this text has its own copyright notice and license, which can usually be found in the distribution or license text itself.