Dialign-t
Dialign-t
http://dialign-tx.gobics.de/
Segment-based multiple sequence alignment
DIALIGN-TX is a command line tool to perform multiple alignment of protein or DNA sequences. It is a complete reimplementation of the segment-base approach including several new improvements and heuristics that significantly enhance the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T. For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that favours chains of low-scoring local alignments over isolated high-scoring fragments. For multiple alignment, DIALIGN-TX uses an improved greedy procedure that is less sensitive to spurious local sequence similarities.
Licensing
License
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License
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Debian
Verified on
20 March 2013
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License: LGPL-2.1+
LGPL-2.1+ The Debian packaging is licensed under the same terms
as DIALIGN-TX itself.License
Verified by
Debian
Verified on
20 March 2013
Notes
License: LGPL-2.1+
LGPL-2.1+ This package is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version.
This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public License along with this package; if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston,
MA 02110-1301 USA
Leaders and contributors
Resources and communication
Audience | Resource type | URI |
---|---|---|
Debian (Ref) | https://tracker.debian.org/pkg/dialign-t |
Software prerequisites
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