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AmpliconNoise
Full description AmpliconNoise is a package of applicationsAmpliconNoise is a package of applications to clean up high- throughput sequence data. It consists of three main parts: Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct. Removing Noise From Pyrosequenced Amplicons Christopher Quince, Anders Lanzen, Russell J Davenport and Peter J Turnbaugh BMC Bioinformatics 2011, 12:38doi:10.1186/1471-2105-12-38ics 2011, 12:38doi:10.1186/1471-2105-12-38
Homepage URL http://code.google.com/p/ampliconnoise/  +
Import date 20 March 2013  +
Import source Debian import  +
Import source link http://packages.debian.org/sid/ampliconnoise  +
Is GNU false  +
License Other + , GPLv3 +
License copyright © © 2009-2011 Christopher Quince <quince@civil.gla.ac.uk> , © © Tim Booth <tbooth@ceh.ac.uk>
License note License: GPL-3 GPL-3 The packaging is licensed under GPL version3 see `/usr/share/common-licenses/GPL-3'.  +
License verified by Debian  +
License verified date 20 March 2013  +
Name Ampliconnoise  +
Real name Tim Booth  +
Resource URL http://code.google.com/p/ampliconnoise/  +
Resource kind Download  +
Revisionid 17,148  +
Revisiontimestamp 27 March 2013 16:53:42  +
Revisionuser User:WikiSysop +
Short description Programs for the removal of noise from 454 sequenced PCR amplicons  +
Submitted by Debian import +
Submitted date 20 March 2013  +
Has queryThis property is a special property in this wiki. AmpliconNoise + , AmpliconNoise + , AmpliconNoise + , AmpliconNoise + , AmpliconNoise + , AmpliconNoise + , AmpliconNoise + , AmpliconNoise + , AmpliconNoise +
Has improper value forThis property is a special property in this wiki. License note  + , Role  +
Modification dateThis property is a special property in this wiki. 1 August 2014 23:35:30  +
Page has default formThis property is a special property in this wiki. Entry  +
Has subobjectThis property is a special property in this wiki. AmpliconNoise + , AmpliconNoise + , AmpliconNoise + , AmpliconNoise +
EmailThis property is a special property in this wiki. tbooth@ceh.ac.uk  +
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