http://directory.fsf.org/wiki?title=CoaSim&feed=atom&action=history 2013-05-22T22:28:47Z Revision history for this page on the wiki MediaWiki 1.20.2 http://directory.fsf.org/wiki?title=CoaSim&diff=5744&oldid=prev 2011-04-12T14:51:41Z

<p>Created page with &quot;{{Entry |Name=CoaSim |Short description=Coalescence process simulator |Full description=&#039;CoaSim&#039; is a tool for simulating the coalescent process with recombination and gene conve...&quot;</p> <p><b>New page</b></p><div>{{Entry<br /> |Name=CoaSim<br /> |Short description=Coalescence process simulator<br /> |Full description='CoaSim' is a tool for simulating the coalescent process with recombination and gene conversion under the assumption of exponential population growth. It constructs the ancestral recombination graph for a given number of individuals and uses this to simulate samples of SNP and micro-satellite haplotypes/genotypes. The generated sample can afterwards be separated in cases and controls, depending on states of selected individual markers. The tool can accordingly also be used to construct cases and control data sets for association studies.<br /> |User level=none<br /> |Status=Live<br /> |Component programs=<br /> |Homepage URL=http://www.birc.dk/Software/CoaSim/<br /> |VCS checkout command=<br /> |Computer languages=C++<br /> |Documentation note=User reference manual available in HTML format from http://www.birc.dk/Software/CoaSim/refman/index.html<br /> |Paid support=<br /> |IRC help=<br /> |IRC general=<br /> |IRC development=<br /> |Related projects=CoaSim-gui<br /> |Keywords=simukation,coalescent,recombination,gene conversion,SNP,micro-satellite,haplotypes,genotypes<br /> |Is GNU=n<br /> |Last review by=Janet Casey<br /> |Last review date=2005-08-03<br /> |Submitted by=Database conversion<br /> |Submitted date=2011-04-01<br /> |Version identifier=4.0.1<br /> |Version date=2005-08-03<br /> |Version status=stable<br /> |Version download=<br /> |License verified date=2005-02-02<br /> |Version comment=4.0.1 stable released 2005-08-03<br /> }}<br /> {{Person<br /> |Role=Maintainer<br /> |Real name=Thomas Mailund<br /> |Email=thomas@mailund.dk<br /> |Resource URL=<br /> }}<br /> {{Resource<br /> |Resource audience=Bug Tracking,Developer,Support<br /> |Resource kind=E-mail<br /> |Resource URL=mailto:mailund@birc.dk<br /> }}<br /> {{Software category<br /> |Interface=command-line<br /> |Science=biology,scientific-visualization<br /> |Use=science<br /> }}<br /> {{Project license<br /> |License=GPLv2<br /> |License verified by=Janet Casey<br /> |License verified date=2005-02-02<br /> }}</div>

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