Difference between revisions of "MayaChemTools"

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{{Entry
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|Name=MayaChemTools
 
|Short description=MayaChemTools is a growing collection of Perl scripts to support day-to-day computational discovery needs.
 
|Full description=MayaChemTools is a growing collection of Perl scripts, modules, and classes to support day-to-day computational discovery needs. The current release of MayaChemtools provides command line scripts for the following tasks:
 
* Manipulation of SD, CSV/TSV, Sequence/Alignments, and PDB files
 
* Analysis of data in SD, CSV/TSV, and Sequence/Alignments files
 
* Information about data in SD, CSV/TSV, Sequence/Alignments, PDB, and fingerprints files
 
* Exporting data from Oracle and MySQL tables into text files
 
* Properties of periodic table elements, amino acids, and nucleic acids
 
* Generation of fingerprints corresponding to atom neighborhoods, atom types, E-state indicies, extended connectivity, MACCS keys, path lengths, topological atom pairs, topological atom triplets, topological atom torsions, topological pharmacophore atom pairs, and topological pharmacophore atom triplets
 
* Generation of fingerprints with atom types corresponding to atomic invariants, DREIDING, E-state, functional class, MMFF94, SLogP, SYBYL, TPSA and UFF
 
* Calculation of similarity matrices using a variety of similarity and distance coefficients
 
* Calculation of physicochemical properties including rotatable bonds, van der Waals molecular volume, hydrogen bond donors and acceptors, logP (SLogP), molar refractivity (SMR), topological polar surface area (TPSA), and so on
 
|User level=intermediate
 
|Status=Live
 
|Component programs=
 
|Homepage URL=http://www.mayachemtools.org
 
|VCS checkout command=
 
|Computer languages=Perl
 
|Documentation note=http://www.mayachemtools.org/docs/html/index.html
 
|Paid support=msud@san.rr.com
 
|IRC help=
 
|IRC general=
 
|IRC development=
 
|Related projects=
 
|Keywords=chemistry,Cheminformatics,CSV/TSV files,SD files
 
|Is GNU=n
 
|Last review by=Manish Sud
 
|Last review date=2010-07-12
 
|Submitted by=Database conversion
 
|Submitted date=2011-04-01
 
|Version identifier=7.0
 
|Version date=2010-07-05
 
|Version status=stable
 
|Version download=http://www.mayachemtools.org/download/mayachemtools.tar.bz2
 
|License verified date=2010-07-12
 
|Version comment=
 
}}
 
{{Person
 
|Role=Maintainer
 
|Real name=Manish Sud
 
|Email=msud@san.rr.com
 
|Resource URL=
 
}}
 
{{Resource
 
|Resource audience=Bug Tracking,Developer,Help,Support
 
|Resource kind=E-mail
 
|Resource URL=mailto:msud@san.rr.com
 
}}
 
{{Software category
 
|Interface=command-line
 
|Science=chemistry
 
|Use=science
 
}}
 
{{Project license
 
|License=LGPLv3
 
|License verified by=Kelly Hopkins
 
|License verified date=2010-07-12
 
}}
 

Revision as of 05:30, 15 February 2017



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