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- Shoulda
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- Shtool
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- Shumway
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- Sidebar In A Can
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- SigmaPi Neurosimulator
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- Signal
- Signal-Mask
- Signal Android
- Signal package for Octave
- Signature
- Signature 2
- Signatures
- Signing-party
- Sigrok-cli
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- Silly Translation library (Silt)
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- SimplePermissiveWithRulesModifiedVersions
- SimplePie
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- Simple Permissive With Rules Modified Versions
- Simple Python Gallery - SPGal
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- Simple World
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- Sisu
- Sisu Guice
- Sisu Inject
- Sisu Maven Plugin
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- Site@School
- SiteBar
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- Sitr
- Six
- Sixlegs Java PNG Decoder
- Sizzle
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- Skdetect
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- Snow Path Formation Simulator
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- Socat
- Social
- Social Networks Visualiser
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- Socket
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- Sockets package for Octave
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- Sonar Sedcat Plugin
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- Songanizer
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