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- Stream
- Stream-Buffered
- Streaming-commons
- Streamly
- Streamtuner
- Streamtuner2
- Strec
- Streetsign
- Stress
- StretchPlayer
- Strict Pop-up Blocker
- Strictures
- Strigi
- String-Approx
- String-CRC-Cksum
- String-CRC32
- String-CamelCase
- String-Compare-ConstantTime
- String-Errf
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- String-Formatter
- String-Glob-Permute
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- String-Parity
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- String-RewritePrefix
- String-Similarity
- String-TT
- String-ToIdentifier-EN
- String-Truncate
- StringTemplate3
- Stringbuilder
- Stringencoders
- Stringex
- Stringprep
- Strings package for Octave
- Strip-nondeterminism
- Stripmgr
- Stroke
- StrongSwan
- Strongswan
- Struct-Dumb
- Struct package for Octave
- Stterm
- Stu
- Stump
- StumpWM
- Stumpwm
- Stunnel
- StuntRally
- Stunt Rally
- Stunt rally
- Stuntrally
- Stvremote
- Stylish
- Stylish User Style Hosting
- Stylus
- Styx
- Sub-Current
- Sub-Exporter
- Sub-Exporter-ForMethods
- Sub-Exporter-GlobExporter
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- Sub-Identify
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- Sub-Name
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- SubNetCalc
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- Submount
- Subnet Mask Calculator
- Subrosa
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- Suckless-tools
- Sudo
- Sudoku
- Sudoku Sensei
- Sudokuki
- Sudoscript
- Suds
- Sugar
- SugarCRM
- Sugar Artwork
- Sugar Base
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- Sugar Toolkit
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- Suil
- Sunbird
- Sunclock
- Sunpinyin
- Sunwait
- Sunxi-tools
- Sup
- Super-sed
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- SuperLU
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- SuperTuxKart
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- Super productivity
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- Supertest
- Supertransball2
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- SureInvoice
- Surf
- Surfraw
- Surge
- Surlex
- Surveillance
- Sushi
- Suspend-utils
- Sussen
- Susy
- Sux0r
- Svg-to-png
- Svglib
- Svgpart
- Svgsalamander
- Svk
- Svn
- Svn2cl
- Svn2git
- Svtplay-dl
- Sw-logger
- Swami
- Swapd
- Swapspace
- Swarp
- Swatd
- Swath
- Sway
- Swbis
- Sweater
- Sweep
- SweepOver
- Sweeper
- SweetHome3D Additional 3D models
- Sweet Home 3D
- Sweet Home 3D Furniture Library Editor
- Sweet Home 3D Textures Library Editor
- Sweethome3d
- Swell-foop
- Swell Foop
- Swftools
- Swfupload
- Swfw
- Swi-prolog
- Swift
- Swift3
- SwiftSurf
- Swiftsc
- Swish
- Swish-E
- Switch
- SwitchTraf
- Swpkg
- Swt-paperclips
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- Sxiv
- SyFi
- Syllogism Quizzer
- Sylph-searcher
- Sylpheed
- Symbio
- Symbol-Global-Name
- Symfony
- Symmetrica
- Sympa
- Symposium
- Syn
- Synaptic
- SyncEvolution
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- Syncthing
- Syncup
- Synergy2
- Synfig
- Synfig Animation Studio
- Synfig Studio
- Synopsis
- Syntax
- Syntax-Highlight-Engine-Kate
- Syntax-Keyword-Gather
- Syntax-Keyword-Junction
- Syntax-desktop
- Synthv1
- Syrep
- Sys-CPU
- Sys-CpuLoad
- Sys-Filesystem
- Sys-Gamin
- Sys-Hostname-Long
- Sys-Mmap
- Sys-Statistics-Linux
- Sys-Syscall
- Sys-Syslog
- Sys-Utmp
- Sys-Virt
- Sysadm-Install
- Sysdig
- Sysfence
- Sysindex
- Syslog-ng
- Syslog-ng-incubator
- Sysmon
- Sysprof
- Sysstat
- System-Command
- System-V banner clone
- System-storage-manager
- System-tools-backends
- SystemImager
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- System call tracker
- Systemd
- Systemd-cron
- Systemd-shim
- Systemd-ui
- Systemu
- Systraq
- Sysutils
- Sysv ipc
- Sysyphus
- T-prot
- T2
- T2html
- T2n
- T2t
- T38modem
- T4k common
- TA-Lib
- TAP-Formatter-HTML
- TAP-Formatter-JUnit
- TAP-Harness-Archive
- TAP-SimpleOutput
- TAP-plugins
- TBCI
- TCD
- TCDR
- TCLP
- TCLink
- TCP Re-engineering
- TCT
- TEA
- TFT Gallery
- TGYUI
- THERMITS
- TLS Checker
- TMDA
- TMSU
- TNT
- TOAD C++ GUI Library
- TOCHNOG
- TOIlet
- TONG
- TPMTOTP
- TRAMP
- TRBot
- TRE
- TSA package for Octave
- TTB
- TTFQuery
- TTRM
- TWIG (obsolete)
- TWiki
- TYPO3
- TZMud
- TabLaunch
- TabTab
- Tab Scope
- Tabbed
- Tabble
- Tabular
- Tack
- Tacshell
- Taekwon-Do Theory Assistant
- Taffybar
- TagLib
- TagPy
- TagTeam
- Tag Manager
- Tag Toolbar
- Tagaini Jisho
- Tagclean
- Taginfo
- Taglib Sharp
- Taglog
- Tagreader
- Tagstoo
- Tahoe-LAFS
- Tahoe-lafs
- Taiga.io
- Taint-Runtime
- Taint-Util
- Tainting
- Taisei
- Takao fonts
- Taler
- Tali
- TalkSoup
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- Talking Puffin
- Tamil Encoding Converters
- Tampermonkey
- Tamuanova
- Tangerine
- Tanglet
- Tangram
- Tanne
- Tap
- Tapeback
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