Programs for the removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high- throughput sequence data. It consists of three main parts:
Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences
Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.
Removing Noise From Pyrosequenced Amplicons Christopher Quince, Anders Lanzen, Russell J Davenport and Peter J Turnbaugh BMC Bioinformatics 2011, 12:38doi:10.1186/1471-2105-12-38
20 March 2013
License: GNU Lesser GPL v3
GNU Lesser GPL v3 This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version.
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On Debian systems, the full text of the GNU LESSER GENERAL PUBLIC LICENSE can be found in the file `/usr/share/common-licenses/LGPL-3'.
20 March 2013
GPL-3 The packaging is licensed under GPL version3 see`/usr/share/common-licenses/GPL-3'.
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|Debian (Ref) (R)||https://tracker.debian.org/pkg/ampliconnoise|
This entry (in part or in whole) was last reviewed on 7 March 2018.
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