Bio-ASN1-EntrezGene

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Bio-asn1-entrezgene

https://metacpan.org/release/Bio-ASN1-EntrezGene
parser for NCBI Entrez Gene and NCBI Sequence records

Bio::ASN1::EntrezGene and Bio::ASN1::Sequence are regular expression-based parsers for NCBI Entrez Gene genome databases (http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene).

They parse ASN.1-formatted Entrez Gene records and NCBI sequences, returning data structures that contain all data items from the gene records or the sequence records.

The parser will report error & line number if input data does not conform to the NCBI Entrez Gene genome or NCBI Sequence annotation file format.

Bio::ASN1::Sequence is basically a modified version of the high- performance Bio::ASN1::EntrezGene parser. However this standalone module exists since it is more efficient to keep Sequence- specific code out of EntrezGene.pm.





Licensing

License

Verified by

Verified on

Notes

License

Other

Verified by

Debian: gregor herrmann <gregoa@debian.org>

Verified on

17 September 2013

Notes

License: artistic or gpl-1+




Leaders and contributors

Contact(s)Role
Dr. Mingyi Liu contact


Resources and communication

AudienceResource typeURI
Perl (Ref)https://metacpan.org/release/Bio-ASN1-EntrezGene
Debian (Ref) (R)https://tracker.debian.org/pkg/libbio-asn1-entrezgene-perl


Software prerequisites




Entry








"contact" is not in the list (Maintainer, Contributor, Developer, Sponsor, Unknown) of allowed values for the "Role" property.


"Debian (Ref) (R)" is not in the list (General, Help, Bug Tracking, Support, Developer) of allowed values for the "Resource audience" property.


"Perl (Ref)" is not in the list (General, Help, Bug Tracking, Support, Developer) of allowed values for the "Resource audience" property.






Date 2015-07-17
Source Debian
Source link http://packages.debian.org/sid/libbio-asn1-entrezgene-perl

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