extension of bioinformatics tools to Iceape and Iceweasel browsers
Code bioFOX aims at implementing various bioinformatics tools as an extension on the Iceape and Iceweasel browsers. Analysis of your favorite gene(s) usually require(s) retrieving it from a database like NCBI or Swiss-Prot and then performing one or more tasks including but not limited to:
- Translation of a nucleotide sequence; * Blast search (eg.
blastn, blastp etc.) of the desired nucleotide/protein sequence; * Calculation of properties (like PI, charge, molecular weight, AT/GC content etc.) of a protein/nucleotide sequence; * Conversion between formats (Genbank, Fasta, Swiss- Prot etc.); * Prediction of sequence for sub-cellular localization (PREDOTAR, TargetP, pSORT etc).
Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts. A copy of the license is included in the page “GNU Free Documentation License”.
The copyright and license notices on this page only apply to the text on this page. Any software or copyright-licenses or other similar notices described in this text has its own copyright notice and license, which can usually be found in the distribution or license text itself.