HapCluster++

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HapCluster++

http://www.daimi.au.dk/~mailund/HapCluster/index.html
An MCMC based statistical tool for association mapping.

HapCluster++ is a software package for linkage disequilibrium mapping using coalescent theory. It is based on a Bayesian Markov-chain Monte Carlo (MCMC) method for fine-scale linkage-disequilibrium gene mapping using high-density marker maps. HapCluster++ is a C++ implementation of the method described in the paper "Fine Mapping of Disease Genes via Haplotype Clustering" by E.R.B. Waldron, J.C. Whitaker, and D.J. Balding. Genetic Epidemiology. 30: 170–179. (2006).





Licensing

License

Verified by

Verified on

Notes

Verified by

Ted Teah

Verified on

10 August 2006




Leaders and contributors

Contact(s)Role
Thomas Mailund Maintainer


Resources and communication

AudienceResource typeURI
Bug Tracking,Developer,Help,SupportE-mailmailto:thomas@mailund.dk


Software prerequisites

This entry (in part or in whole) was last reviewed on 26 February 2017.



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