Seg
Seg
ftp://ftp.ncbi.nih.gov/pub/seg/seg/
tool to mask segments of low compositional complexity in amino acid sequences
ncbi-seg (a.k.a. SEG) is a program for identifying and masking segments of low compositional complexity in amino acid sequences.
ncbi-seg divides sequences into contrasting segments of low- complexity and high-complexity. Low-complexity segments defined by the algorithm represent "simple sequences" or "compositionally-biased regions".
This program is inappropriate for masking nucleotide sequences and, in fact, may strip some nucleotide ambiguity codes from nt. sequences as they are being read.
Download
http://ftp.debian.org/debian/pool/main/n/ncbi-seg/ncbi-seg_0.0.20000620.orig.tar.gz
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License
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Debian: Laszlo Kajan <lkajan@debian.org>
Verified on
13 September 2014
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License: public-domain
public-domain PUBLIC DOMAIN NOTICE National Center for Biotechnology Information
This software/database is a "United States Government Work" under the terms of the United States Copyright Act. It was written as part of the authors' official duties as United States Government employees and thus cannot be copyrighted. This software/database is freely available to the public for use. The National Library of Medicine and the U.S. Government have not placed any restriction on its use or reproduction.
Although all reasonable efforts have been taken to ensure the accuracy and reliability of the software and data, the NLM and the U.S. Government do not and cannot warrant the performance or results that may be obtained by using this software or data. The NLM and the U.S. Government disclaim all warranties, express or implied, including warranties of performance, merchantability or fitness for any particular purpose.
Please cite the authors in any work or product based on this material.
Authors: John C. Wootton, Scott Federhen National Center For Biotechnology Information National Library of
Medicine National Institutes of Health
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Contact(s) | Role |
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John Wootton | contact |
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