Staden-io-lib

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Staden-io-lib

http://staden.sourceforge.net/
Staden library for reading and writing DNA sequencing results

This package contains the Staden io_lib, that is renamed in Debian and Fedora ‘staden-read’ instead of ‘read’. This library supports various DNA sequence read formats, in particular SCF, ABI, ALF, CTF, ZTR, SFF and SRF.

The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows.





Licensing

License

Verified by

Verified on

Notes

License

Other

Verified by

Debian: Charles Plessy <plessy@debian.org>

Verified on

20 June 2014

Notes

License: grl or mrc, and 454

GRL or MRC, and 454 This file contains some source code owned by

454 Life Sciences Corporation.

License

Other

Verified by

Debian: Charles Plessy <plessy@debian.org>

Verified on

20 June 2014

Notes

License: says-public-domain

says-public-domain This is an OpenSSL-compatible implementation of the RSA Data Security, Inc. MD5 Message-Digest Algorithm (RFC 1321).

Homepage: http://openwall.info/wiki/people/solar/software/public- domain-source-code/md5

Author: Alexander Peslyak, better known as Solar Designer <solar at openwall.com>

This software was written by Alexander Peslyak in 2001. No copyright is claimed, and the software is hereby placed in the public domain. In case this attempt to disclaim copyright and place the software in the public domain is deemed null and void, then the software is Copyright (c) 2001 Alexander Peslyak and it is hereby released to the general public under the following terms:

Redistribution and use in source and binary forms, with or without modification, are permitted.

There's ABSOLUTELY NO WARRANTY, express or implied.

(This is a heavily cut-down "BSD license".)

This differs from Colin Plumb's older public domain implementation in that no exactly 32-bit integer data type is required (any 32-bit or wider unsigned integer data type will do), there's no compile-time endianness configuration, and the function prototypes match OpenSSL's. No code from Colin Plumb's implementation has been reused; this comment merely compares the properties of the two independent implementations.

The primary goals of this implementation are portability and ease of use. It is meant to be fast, but not as fast as possible. Some known optimizations are not included to reduce source code

size and avoid compile-time configuration.

License

Other

Verified by

Debian: Charles Plessy <plessy@debian.org>

Verified on

20 June 2014

Notes

License: grl and 454

GRL and 454 This file contains some extracts from a file owened

by the 454 Life Sciences Corporation.

License

Other

Verified by

Debian: Charles Plessy <plessy@debian.org>

Verified on

20 June 2014

Notes

License: grl or mrc

License

Other

Verified by

Debian: Charles Plessy <plessy@debian.org>

Verified on

20 June 2014

Notes

License: grl-new




Leaders and contributors

Resources and communication

AudienceResource typeURI
Downloadhttp://qa.debian.org/watch/sf.php/staden/io_lib-1.13.7.tar.gz
Debian (Ref)https://tracker.debian.org/pkg/staden-io-lib


Software prerequisites




Entry




Date 2015-07-17
Source Debian
Source link http://packages.debian.org/sid/staden-io-lib

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The copyright and license notices on this page only apply to the text on this page. Any software or copyright-licenses or other similar notices described in this text has its own copyright notice and license, which can usually be found in the distribution or license text itself.