Difference between revisions of "Bamtools"

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|Homepage URL=https://github.com/pezmaster31/bamtools/wiki
 
|Homepage URL=https://github.com/pezmaster31/bamtools/wiki
 
|VCS checkout command=git clone https://github.com/pezmaster31/bamtools
 
|VCS checkout command=git clone https://github.com/pezmaster31/bamtools
 +
|Accepts cryptocurrency donations=No
 
|Version identifier=2.3.0
 
|Version identifier=2.3.0
 
|Version date=2013/07/24
 
|Version date=2013/07/24
 
|Version status=stable
 
|Version status=stable
 
|Version download=https://github.com/pezmaster31/bamtools
 
|Version download=https://github.com/pezmaster31/bamtools
|Last review by=Jgay
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|Last review by=Bendikker
|Last review date=2014/06/20
+
|Last review date=2018/02/07
|Submitted by=bethlynn
 
 
|Submitted date=2014/06/20
 
|Submitted date=2014/06/20
|Status=
 
 
|Is GNU=No
 
|Is GNU=No
 
}}
 
}}
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|Role=primary contact
 
|Role=primary contact
 
|Email=derekwbarnett@gmail.com
 
|Email=derekwbarnett@gmail.com
|Resource URL=
 
 
}}
 
}}
{{Person
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{{Person}}
|Resource URL=
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{{Resource
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|Resource audience=Debian (Ref)
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|Resource URL=https://tracker.debian.org/pkg/bamtools
 
}}
 
}}
 
{{Resource
 
{{Resource
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|Resource URL=https://github.com/pezmaster31/bamtools/wiki/Mailing-lists
 
|Resource URL=https://github.com/pezmaster31/bamtools/wiki/Mailing-lists
 
}}
 
}}
{{Resource}}
 
 
{{Software category
 
{{Software category
 
|Biology=genetics
 
|Biology=genetics

Latest revision as of 02:41, 15 February 2018


[edit]

bamtools

https://github.com/pezmaster31/bamtools/wiki
tools for handling genome alignment (BAM) files.

BamTools provides both a programmer's API and an end-user's toolkit for handling genome alignment files in the BAM and SAM format. A BAM file (.bam) is the binary version of a SAM file. A SAM file (.sam) is a tab-delimited text file that contains sequence alignment data.





Licensing

License

Verified by

Verified on

Notes

License

Expat

Verified by

Jgay

Verified on

20 June 2014




Leaders and contributors

Contact(s)Role
Derek Barnett primary contact


Resources and communication

AudienceResource typeURI
Debian (Ref)https://tracker.debian.org/pkg/bamtools
bamtools usersMailing Listhttps://github.com/pezmaster31/bamtools/wiki/Mailing-lists


Software prerequisites

KindDescription
Required to buildcmake
{{{Prerequisite description}}}




Entry





"primary contact" is not in the list (Maintainer, Contributor, Developer, Sponsor, Unknown) of allowed values for the "Role" property.





"Debian (Ref)" is not in the list (General, Help, Bug Tracking, Support, Developer) of allowed values for the "Resource audience" property.


"bamtools users" is not in the list (General, Help, Bug Tracking, Support, Developer) of allowed values for the "Resource audience" property.






"{{{Prerequisite kind}}}" is not in the list (Required to use, Required to build, Source requirement, Weak prerequisite) of allowed values for the "Prerequisite kind" property.






Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts. A copy of the license is included in the page “GNU Free Documentation License”.

The copyright and license notices on this page only apply to the text on this page. Any software or copyright-licenses or other similar notices described in this text has its own copyright notice and license, which can usually be found in the distribution or license text itself.