genome variant calling and RNA-seq analysis
A python toolkit providing best-practice pipelines for fully automated high throughput RNA sequencing analysis. It can work with BWA, .bam or .fastq files.
nextgen install.py Download
released on 20 June 2014
Extension or PluginThis package can be used as an extension, plugin, or add-on to:
|License||Verified by||Verified on||Notes|
Full license text: https://github.com/chapmanb/bcbio-nextgen/blob/master/LICENSE.txt
Leaders and contributors
|Brad Chapman||primary contact|
Resources and communication
|geomes and RNA-seq tools user group||Mailing List||https://groups.google.com/forum/#!forum/biovalidation|
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