Beagle-lib
Beagle-lib
http://code.google.com/p/beagle-lib
High-performance lib for Bayesian and Maximum Likelihood phylogenetics
BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It can make use of highly-parallel processors such as those in graphics cards (GPUs) found in many PCs.
The project involves an open API and fast implementations of a library for evaluating phylogenetic likelihoods (continuous time Markov processes) of biomolecular sequence evolution.
The aim is to provide high performance evaluation 'services' to a wide range of phylogenetic software, both Bayesian samplers and Maximum Likelihood optimizers. This allows these packages to make use of implementations that make use of optimized hardware such as graphics processing units.
Licensing
License
Verified by
Verified on
Notes
License
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Debian
Verified on
20 March 2013
Notes
License: LGPL-3+ LGPL-3+ Same license as the software itself
License
Verified by
Debian
Verified on
20 March 2013
Notes
License: LGPL-3+
LGPL-3+ This program is free software: you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public License along with this program. If not, see <http://www.gnu.org/licenses/>.
On Debian systems, you can read the full text of the GNU Lesser
General Public License in ‘/usr/share/common-licenses/LGPL-3’.
Leaders and contributors
| Contact(s) | Role |
|---|---|
| Aaron Darling | contact |
Resources and communication
| Audience | Resource type | URI |
|---|---|---|
| Download | http://code.google.com/p/beagle-lib/source/browse/#svn%2Ftags | |
| Debian (Ref) (R) | https://tracker.debian.org/pkg/libhmsbeagle |
Software prerequisites
Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts. A copy of the license is included in the page “GNU Free Documentation License”.
The copyright and license notices on this page only apply to the text on this page. Any software or copyright-licenses or other similar notices described in this text has its own copyright notice and license, which can usually be found in the distribution or license text itself.