Difference between revisions of "Bioperl"
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{{Entry | {{Entry | ||
− | |Name= | + | |Name=BioPerl |
− | |Short description= | + | |Short description=Tools for computational molecular biology. |
|Full description=The Bioperl project is a coordinated effort to collect | |Full description=The Bioperl project is a coordinated effort to collect | ||
computational methods routinely used in bioinformatics into a set | computational methods routinely used in bioinformatics into a set | ||
Line 13: | Line 13: | ||
The suggested package enhances the manual pages. | The suggested package enhances the manual pages. | ||
− | |Homepage URL= | + | |Homepage URL=https://bioperl.org/ |
− | | | + | |Is High Priority Project=No |
− | | | + | |VCS checkout command=https://github.com/bioperl/bioperl-live.git |
+ | |Documentation note=https://bioperl.org/howtos/index.html | ||
+ | |||
+ | ---- | ||
+ | ---- | ||
+ | |||
+ | If you have corrections to this entry or questions about it, please contact: mailto:directory-discuss@gnu.org | ||
+ | ---- | ||
+ | |Decommissioned or Obsolete=No | ||
+ | |Microblog=https://twitter.com/bioperl | ||
+ | |IRC general=irc://irc.freenode.net/#bioperl | ||
+ | |Version identifier=1.7.7 | ||
+ | |Version date=2019/12/07 | ||
+ | |Version status=stable | ||
+ | |Version download=https://github.com/bioperl/bioperl-live/archive/BioPerl-v1.7.7.tar.gz | ||
|Last review by=Bendikker | |Last review by=Bendikker | ||
|Last review date=2018/02/07 | |Last review date=2018/02/07 | ||
|Submitted date=2013-03-20 | |Submitted date=2013-03-20 | ||
+ | |Paid support=https://www.fsf.org/resources/service/ | ||
+ | |Accepts cryptocurrency donations=No | ||
+ | |Test entry=No | ||
|Is GNU=No | |Is GNU=No | ||
}} | }} | ||
Line 253: | Line 270: | ||
}} | }} | ||
{{Resource | {{Resource | ||
− | |Resource kind= | + | |Resource audience=Perl (Ref) (R) |
− | |Resource URL= | + | |Resource URL=https://metacpan.org/release/BioPerl |
+ | }} | ||
+ | {{Resource | ||
+ | |Resource kind=VCS Repository Webview | ||
+ | |Resource URL=https://github.com/bioperl/bioperl-live | ||
+ | }} | ||
+ | {{Resource | ||
+ | |Resource kind=Mailing List | ||
+ | |Resource URL=https://lists.open-bio.org/mailman/listinfo/bioperl-l | ||
+ | }} | ||
+ | {{Resource | ||
+ | |Resource kind=Mailing List | ||
+ | |Resource URL=https://lists.open-bio.org/mailman/listinfo/bioperl-guts-l | ||
+ | }} | ||
+ | {{Resource | ||
+ | |Resource kind=Mailing List | ||
+ | |Resource URL=https://lists.open-bio.org/mailman/listinfo/bioperl-announce-l | ||
+ | }} | ||
+ | {{Software category | ||
+ | |Biology=health-and-medicine | ||
+ | |Programming-language=perl | ||
+ | |Runs-on=GNU/Linux | ||
}} | }} | ||
− | |||
{{Featured}} | {{Featured}} | ||
{{Import | {{Import |
Revision as of 07:40, 29 March 2020
BioPerl
https://bioperl.org/
Tools for computational molecular biology.
The Bioperl project is a coordinated effort to collect computational methods routinely used in bioinformatics into a set of standard CPAN-style, well-documented, and freely available Perl modules. It is well-accepted throughout the community and used in many high-profile projects, e.g., Ensembl.
The recommended packages are needed to run some of the included binaries, for a detailed explanation including the specific Perl modules please see README.Debian.
The suggested package enhances the manual pages.
Licensing
License
Verified by
Verified on
Notes
License
Verified by
Debian
Verified on
20 March 2013
Notes
"Warning" only GPLv1orlater (from the Perl license) is a free licene.
Leaders and contributors
Resources and communication
Audience | Resource type | URI |
---|---|---|
Mailing List | https://lists.open-bio.org/mailman/listinfo/bioperl-announce-l | |
Mailing List | https://lists.open-bio.org/mailman/listinfo/bioperl-guts-l | |
Mailing List | https://lists.open-bio.org/mailman/listinfo/bioperl-l | |
VCS Repository Webview | https://github.com/bioperl/bioperl-live | |
Perl (Ref) (R) | https://metacpan.org/release/BioPerl | |
Debian (Ref) | https://tracker.debian.org/pkg/bioperl |
Software prerequisites
Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts. A copy of the license is included in the page “GNU Free Documentation License”.
The copyright and license notices on this page only apply to the text on this page. Any software or copyright-licenses or other similar notices described in this text has its own copyright notice and license, which can usually be found in the distribution or license text itself.