Difference between revisions of "Category/Biology"
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Revision as of 17:39, 14 April 2011
- Achoz
- organize all of your own world data
- Aletheia
- Aletheia is a decentralised open access publishing platform for scientific research.
- Amide
- software for Medical Imaging
- Antidote
- IEEE 11073-20601 stack
- Arvados
- Arvados is a free and open source platform for big data science.
- Bamtools
- tools for handling genome alignment (BAM) files.
- Bcbio-nextgen
- Genome variant calling and RNA-seq analysis.
- BioMail
- Biomedical literature alert tool
- BioRuby
- Bioinformatics library for Ruby.
- Bioinformatics Template Library
- Library for life sciences programming
- Bioperl
- Tools for computational molecular biology.
- Bioperl-run
- Interface to bioinformatics applications.
- Biskit
- a python library for structural bioinformatics research.
- Blossoc
- A block-association mapping tool.
- Bmrblib
- The Biological Magnetic Resonance Data Bank (BioMagResBank or BMRB) library
- CAGE
- a generic and fairly complete cellular automata simulation engine.
- CT Sim
- Computed tomography simulator
- CoaSim
- Coalescence process simulator
- CoaSim-gui
- GUI for the CoaSim coalescence process simulator
- CvEyeTracker
- Tools for eye tracking
- DataStatix
- A free software to manage data and statistics with MySql
- Datamash
- Scriptable statistics and data calculation.
- Discosnp
- Discovering Single Nucleotide Polymorphism from raw set(s) of reads.
- Drmaa
- Distributed Resource Management Application API.
- E-CELL Simulation Environment
- Software for cellular and biochemical modeling and simulation
- Edlib
- Lightweight, super fast C/C++ library for sequence alignment using edit distance
- Electrocardiognosis
- Helps doctors make diagnoses from ECG readings
- EpiR
- Tools for the Analysis of Epidemiological Data.
- FastDNAml
- Phylogenetic analysis software
- FastQC
- Spot potential problems in high througput sequencing datasets.
- FreeLIMS
- FreeLIMS is a Laboratory Information Management System.
- FreeMED
- A Web-based medical record (EMR) and medical practice management system.
- GAUL
- Library for programming applications using genetic algorithms
- GENtle
- Bioinformatics software for everyday molecular biology tasks
- Genometools
- The GenomeTools genome analysis system is a free collection of bioinformatics tools.
- Gnotary
- Medical practitioners digital notary service.
- Gnumed
- Cross platform medical record software.
- HASAS
- HydroAcoustic Signal Analysis System
- Health
- Hospital and Health Information System.
- HealthBox
- An open source platform for centralizing health information between apps
- Homoeopim
- Toy homoeopathy software
- INFOTOPO
- Programs for Information Topology Data Analysis Information Topology
- ImageJ
- Image Processing and Analysis in Java
- Interval RPN Calculator
- IRPN Calc
- KNIME
- KNIME is a user-friendly graphical workbench for the entire analysis process
- Librsb
- A shared memory parallel sparse matrix library including Sparse BLAS.
- Minfx
- The minfx optimisation library
- Mondo Health Monitor
- A system health monitoring daemon based on lm_sensors.
- NUT nutrition software
- dietary nutrition analysis software
- Network Extraction from Images
- Tool to extract networks from images as graphs
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