Difference between revisions of "Pysam"
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It's a lightweight wrapper of the samtools C-API. | It's a lightweight wrapper of the samtools C-API. | ||
|Homepage URL=https://github.com/pysam-developers/pysam | |Homepage URL=https://github.com/pysam-developers/pysam | ||
| − | | | + | |Is High Priority Project=No |
| − | + | |Accepts cryptocurrency donations=No | |
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|Version identifier=0.7.7-1 | |Version identifier=0.7.7-1 | ||
| − | |Version download=http://ftp.debian.org/debian/pool/main/p/python-pysam/python-pysam_0.7.7.orig.tar.gz | + | |Version download=http://ftp.debian.org/debian/pool/main/p/python-pysam/python-pysam_0.7.7.orig.tar.gz |
| − | | | + | |Last review by=Bendikker |
| + | |Last review date=2018/04/05 | ||
|Submitted date=2015-07-17 | |Submitted date=2015-07-17 | ||
| − | + | |Is GNU=No | |
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}} | }} | ||
{{Project license | {{Project license | ||
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{{Resource | {{Resource | ||
| − | |Resource | + | |Resource audience=Python (Ref) |
| − | |Resource URL=https://pypi | + | |Resource URL=https://pypi.org/project/pysam |
| + | }} | ||
| + | {{Resource | ||
| + | |Resource audience=Debian (Ref) (R) | ||
| + | |Resource URL=https://tracker.debian.org/pkg/python-pysam | ||
| + | }} | ||
| + | {{Software category}} | ||
| + | {{Featured}} | ||
| + | {{Import | ||
| + | |Date=2015-07-17 | ||
| + | |Source=Debian | ||
| + | |Source link=http://packages.debian.org/sid/python-pysam | ||
}} | }} | ||
Latest revision as of 07:01, 5 April 2018
Pysam
https://github.com/pysam-developers/pysam
interface for the SAM/BAM sequence alignment and mapping format
Pysam is a Python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API.
Download
http://ftp.debian.org/debian/pool/main/p/python-pysam/python-pysam_0.7.7.orig.tar.gz
Categories
Licensing
License
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License
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Debian: Charles Plessy <plessy@debian.org>
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19 April 2014
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License: bsdlike1
BSDlike1 Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF
THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.License
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Debian: Charles Plessy <plessy@debian.org>
Verified on
19 April 2014
Notes
License: publicdomain
PublicDomain No copyright is claimed. This code is in the public
domain; do with it what you wish.License
Verified by
Debian: Charles Plessy <plessy@debian.org>
Verified on
19 April 2014
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License: mit
License
Verified by
Debian: Charles Plessy <plessy@debian.org>
Verified on
19 April 2014
Notes
License: publicdomain PublicDomain This file is in public domain.
License
Verified by
Debian: Charles Plessy <plessy@debian.org>
Verified on
19 April 2014
Notes
License: bsdlike2
BSDlike2 This software is provided 'as-is', without any express or implied warranty. In no event will the authors be held liable for any damages arising from the use of this software.
Permission is granted to anyone to use this software for any purpose, including commercial applications, and to alter it and redistribute it freely, subject to the following restrictions:
1. The origin of this software must not be misrepresented; you must not claim that you wrote the original software. If you use this software in a product, an acknowledgment in the product documentation would be appreciated but is not required. 2. Altered source versions must be plainly marked as such, and must not be misrepresented as being the original software. 3. This notice may not be removed or altered from any
source distribution.
Leaders and contributors
| Contact(s) | Role |
|---|---|
| Andreas Heger | contact |
Resources and communication
| Audience | Resource type | URI |
|---|---|---|
| Debian (Ref) (R) | https://tracker.debian.org/pkg/python-pysam | |
| Python (Ref) | https://pypi.org/project/pysam |
Software prerequisites
Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts. A copy of the license is included in the page “GNU Free Documentation License”.
The copyright and license notices on this page only apply to the text on this page. Any software or copyright-licenses or other similar notices described in this text has its own copyright notice and license, which can usually be found in the distribution or license text itself.