- The Bioperl project is a coordinated effort to collect computational methods routinely used in bioinformatics into a set of standard CPAN-style, well-documented, and freely available Perl modules. It is well-accepted throughout the community and used in many high-profile projects, e.g., Ensembl. The recommended packages are needed to run some of the included binaries, for a detailed explanation including the specific Perl modules please see README.Debian. The suggested package enhances the manual pages.
- Contains scripts from the BioPerl-Run package. This package will also install all wrappable applications packaged in Debian. The ones that are not Free are "Suggested" by this package.
- 'Brinance' is a financial planning and tracking program, hoping to be a functional replacement for something more complicated like GnuCash for those who prefer the command line. It has a few advanced features, such as scheduling transactions in the future and having as many accounts as one might want.
- Burn 360
This is a candidate for deletion: Unclear licensing. The source files do not include any copyright information. The licence of the documentation on the website and included with the program is unclear. A copy of the GPLv2 is included with the program. Drw (talk) 09:20, 18 July 2018 (EDT)
This is a frontend to three programs - ffmpeg, vcdimager and cdrdao written in perl-gtk2.
It is designed to enable (as seperate processes)
Rip video tracks from VCD's
Encode from/to any format that ffmpeg supports (these are in a seperate file called opts)
Create a new VCD from MPEG's on hard drive.
- CDimg tools is a set of command line tools to manipulate CD/DVD images of certain formats.
- Intended for sys admins, CFEngine is a tool for setting up and maintaining BSD and System 5-like operating systems optionally attached to a TCP/IP network. The program focuses on a few key areas that scripts tend to mishandle. From a single configuration files (or set of files) you specify, using classes, your network configuration; cfengine then parses the file and carries out the instructions, warning you about errors (or fixing them) as it goes. You can think of cfengine as a very high level language, higher than Perl or shell. A single command can result in many hundreds of operations being performed on multiple hosts. You can also use it as a net-wide front end for 'cron.'
- 'cmail' is a simple mail counting tool. It reads in a config file and returns which mailfiles contain mail, how much mail, and how many new messages. It can count messages in mbox style mailfiles, gzipped mbox files, POP3, Maildir, IMAP, POP3/SSL, and IMAP/SSL accounts.
- Most terminals are capable of displaying 16 colors; 8 colors and 2 different brightness values, some (like xterm) can display more, even 256 colors. The colortest package includes set of utilities to help test how many colors a terminal can show. These color settings depend on the $TERM environment variable and termcap entry and by adjusting or selecting correct values, higher colors may be available. The following numbers of colors can be tested for: 8, 16 and 256 colors.
- CONS is a replacement for GNU Make. It is not compatible with make, but it offers features not found in make or other build tools including:
- integrated dependency analysis (no more "make depend" to generate static lists of .h files)
- complete, non-recursive dependency analysis across multiple directories;
- multiple side-by-side variant builds;
- compilation from MD5 signatures instead of time stamps for determining whether a file is up-to-date
- extensibility via Perl.
- Perl program to transform the 'cvs log' output to HTML. The HTML output shows the revision log history and differences between versions, and can be configured to show the amount of information the user like to see from the CVS repository. cvs2html can be used for any type of cvs archive. The program can be used on any type of cvs archive, but since it invokes cvs itself, it must be run onn a machine with a local checked out copy of the archive and access to the repsitory.
- 'cvschk' is a Perl program which transforms the 'cvs status' output to an ASCII table sorted according file status. It gives an overview of which files are new and which have been changed. Note that the program does *only* local checks of files. If you have fast access to the CVS repository, then consider using cvsstat, which can also tell if other people have made newer versions of the files. It's also designed for CVS 1.9; earlier or later versions may require changes to the script.
- 'cvsstat' transforms the 'cvs status' output to an ASCII table sorted after the status of files. It can be used for any type of CVS archive, local as well as remote. Note that the program requires fast access to the repository.
- cWriter is a Web-based collaborative writer. It's homepage is in French, went offline in 2007 so the homepage link is to archive.org. It's source code has translations for English, Spanish, German, and French. Its goal is to facilitate working on a document online and collaborating with peers. It includes tools like a calendar, a file repository, user permissions fixed per document, a bookmark database, a full text search engine, advanced log visibility, and more. cWriter can also be used as an intranet freeform tool.
- dTemplate is a flexible template system. It can generate HTML or newsletters, etc., and is similar to the CGI::FastTemplate system in that it separates the code from the design. You can define only one kind of template variable (placeholder), but you can assign anything you want to it, even an unnamed subroutine, which can parse other templates. You can define a template parse tree this way. Advanced features include printf formatting of template variables (for statistic generation), transparent handling of multiple styles of a template (for multi-language sites or skinned web-pages), and encoders (uri_encoder and html_encoder). You can write template-parsing routines in the same way the templates are structured logically: starting from the biggest and going to the smallest.
- You need this if you want to use webservices with DotGNU and DotGNU Portable.NET. The DotGNU Execution Environment provides the core webservice component of DotGNU and provides the functionality of accepting, validating and satisfying web service requests.
- The Display Ghostscript System is functionally upward-compatible with Adobe Display PostScript, but it has been written independently. The Display Ghostscript System provides a device-independent imaging model for displaying information on a screen. The imaging model uses the PostScript language which has powerful graphics capabilities and frees the programmer from display-specific details like screen resolution and color issues.
- This module replaces procmail or Mail::Audit, and allows you to write programs describing how your mail should be filtered.
- Email::Simple - simple parsing of RFC2822 message format and headers Email::Simple::Creator - private helper for building Email::Simple objects Email::Simple::Header - the header of an Email::Simple message
- Email Reminders is a combination of scripts - a set of PHP scripts for data input and display, and a Perl cron script - that will send an email to your specified email address at a certain date and time. It uses MySQL as the default database and archives the email, datetime,subject, and body of the email.
- EPrints is an online archiving system. Documents are stored in any format as well as in more than one document format. The archive can handle related fields; the administrator decides what fields to use for each document. Users can also view and search the archive through a configurable, extendable subject hierarchy . The software automatically performs data integrity checks. Some "stub" routines let individual sites add their own integrity checks. Documents are submitted through a Web-based interface, and uploaded as files, in a compressed bundled file (such as a .zip file), or automatically mirrored from another site by specifying a URL. Users subscribe either as authors or readers, via the Web or email. Authors have associated metadata. Submitted papers are entered directly or through a moderation process. This is done through the Web, as is most normal maintenance.
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