VelvetOptimiser
Velvetoptimiser
http://bioinformatics.net.au/software.velvetoptimiser.shtml
automatically optimise Velvet do novo assembly parameters
VelvetOptimiser is a multi-threaded Perl script for automatically optimising the three primary parameter options (K, -exp_cov, -cov_cutoff) for the Velvet de novo sequence assembler.
Download
http://ftp.debian.org/debian/pool/main/v/velvetoptimiser/velvetoptimiser_2.2.5.orig.tar.gz
Categories
Licensing
License
Verified by
Verified on
Notes
License
Verified by
Debian: Andreas Tille <tille@debian.org>
Verified on
30 June 2014
Notes
License: gpl-2+
Leaders and contributors
Contact(s) | Role |
---|---|
Simon Gladman | contact |
Resources and communication
Audience | Resource type | URI |
---|---|---|
Debian (Ref) (R) | https://tracker.debian.org/pkg/velvetoptimiser | |
Download | http://bioinformatics.net.au/software.velvetoptimiser.shtml |
Software prerequisites
Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts. A copy of the license is included in the page “GNU Free Documentation License”.
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