Anfo

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Anfo

http://bioinf.eva.mpg.de/anfo/
Short Read Aligner/Mapper from MPG

Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes more after BLAST/BLAT. It's most useful for the alignment of sequencing reads where the DNA sequence is somehow modified (think ancient DNA or bisulphite treatment) and/or there is more divergence between sample and reference than what fast mappers will handle gracefully (say the reference genome is missing and a related species is used instead).





Licensing

License

Verified by

Verified on

Notes

License

Other

Verified by

Debian: Andreas Tille <tille@debian.org>

Verified on

8 February 2014

Notes

License: gplv3+

License

Other

Verified by

Debian: Andreas Tille <tille@debian.org>

Verified on

8 February 2014

Notes

License: bsdlike




Leaders and contributors

Contact(s)Role
Udo Stenzel contact


Resources and communication

AudienceResource typeURI
Downloadhttps://bioinf.eva.mpg.de/anfo/
Debian (Ref)https://tracker.debian.org/pkg/anfo


Software prerequisites

This entry (in part or in whole) was last reviewed on 6 February 2018.



Entry




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Date 2015-07-17
Source Debian
Source link http://packages.debian.org/sid/anfo

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