GenomicFeatures
Genomicfeatures
http://www.bioconductor.org/packages/release/bioc/html/GenomicFeatures.html
GNU R tools for making and manipulating transcript centric annotations
A set of tools and methods for making and manipulating transcript centric annotations. With these tools the user can easily download the genomic locations of the transcripts, exons and cds of a given organism, from either the UCSC Genome Browser or a BioMart database (more sources will be supported in the future). This information is then stored in a local database that keeps track of the relationship between transcripts, exons, cds and genes. Flexible methods are provided for extracting the desired features in a convenient format.
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License
Verified by
Verified on
Notes
License
Verified by
Debian: Andreas Tille <tille@debian.org>
Verified on
4 October 2014
Notes
License: artistic-2.0
Leaders and contributors
| Contact(s) | Role |
|---|---|
| Bioconductor Package Maintainer | contact |
Resources and communication
| Audience | Resource type | URI |
|---|---|---|
| Debian (Ref) (R) | https://tracker.debian.org/pkg/r-bioc-genomicfeatures | |
| Download | http://www.bioconductor.org/packages/release/bioc/html/GenomicFeatures.html |
Software prerequisites
Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts. A copy of the license is included in the page “GNU Free Documentation License”.
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