IPiG
Ipig
http://sourceforge.net/projects/ipig/
integrating PSMs into genome browser visualisations
iPiG targets the integration of peptide spectrum matches (PSMs) from mass spectrometry (MS) peptide identifications into genomic visualisations provided by genome browser such as the UCSC genome browser (http://genome.ucsc.edu/).
iPiG takes PSMs from the MS standard format mzIdentML (*.mzid) or in text format and provides results in genome track formats (BED and GFF3 files), which can be easily imported into genome browsers.
Licensing
License
Verified by
Verified on
Notes
License
Verified by
Debian: Andreas Tille <tille@debian.org>
Verified on
8 February 2014
Notes
License: bsdlike
Leaders and contributors
| Contact(s) | Role |
|---|---|
| Mathias Kuhring | contact |
Resources and communication
| Audience | Resource type | URI |
|---|---|---|
| Debian (Ref) (R) | https://tracker.debian.org/pkg/ipig | |
| Download | http://sourceforge.net/projects/ipig/files/ |
Software prerequisites
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